Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.91□□□□□ -0.18
Chd3B1AR17 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.91□□□□□ -0.18
Chd3B1AR17 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Chd3B1AR17 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Chd3B1AR17 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Chd3B1AR17 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.91□□□□□ -0.18
Chd3B1AR17 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chd3B1AR17 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.91□□□□□ -0.18
Chd3B1AR17 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.91□□□□□ -0.18
Chd3B1AR17 Gm45668-201ENSMUST00000211271 493 ntBASIC13.91□□□□□ -0.18
Chd3B1AR17 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.91□□□□□ -0.18
Chd3B1AR17 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.91□□□□□ -0.18
Chd3B1AR17 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd3B1AR17 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chd3B1AR17 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.9□□□□□ -0.18
Chd3B1AR17 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm11524-201ENSMUST00000119349 807 ntBASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm14928-201ENSMUST00000120198 477 ntBASIC13.9□□□□□ -0.18
Chd3B1AR17 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.9□□□□□ -0.18
Chd3B1AR17 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm5354-201ENSMUST00000182417 973 ntBASIC13.9□□□□□ -0.18
Chd3B1AR17 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd3B1AR17 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.9□□□□□ -0.18
Chd3B1AR17 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd3B1AR17 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chd3B1AR17 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chd3B1AR17 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Chd3B1AR17 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Chd3B1AR17 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Chd3B1AR17 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd3B1AR17 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms