Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm27430-201ENSMUST00000184585 107 ntBASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gm44333-201ENSMUST00000197168 107 ntBASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4a-psA0A0G2JFS9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4a-psA0A0G2JFS9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.26■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm6888-201ENSMUST00000221983 706 ntBASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm43703-201ENSMUST00000200523 763 ntBASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm15653-201ENSMUST00000119247 907 ntBASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.23■□□□□ 0.35
Atg4a-psA0A0G2JFS9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms