Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm1818-201ENSMUST00000169406 1184 ntBASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav8-1A0A075B641 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav8-1A0A075B641 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms