Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm43125-201ENSMUST00000201724 730 ntBASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb2S4R1M3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm25287-201ENSMUST00000103846 110 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm22918-201ENSMUST00000103855 110 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm2756-201ENSMUST00000195851 400 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm44335-201ENSMUST00000196879 141 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm44297-201ENSMUST00000198304 141 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm44346-201ENSMUST00000198851 141 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afb2S4R1M3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afb2S4R1M3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Gm13015-201ENSMUST00000118674 204 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms