Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2afb3S4R1G7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Mzt1-203ENSMUST00000227948 952 ntBASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb3S4R1G7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb3S4R1G7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
H2afb3S4R1G7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb3S4R1G7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
H2afb3S4R1G7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afb3S4R1G7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb3S4R1G7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms