Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mrpl40Q9Z2Q5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm27920-201ENSMUST00000183953 96 ntBASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mrpl40Q9Z2Q5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm38294-201ENSMUST00000192831 381 ntBASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.28□□□□□ -0.12
Mrpl40Q9Z2Q5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.27□□□□□ -0.12
Mrpl40Q9Z2Q5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm12151-201ENSMUST00000121374 290 ntBASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm27618-201ENSMUST00000183671 60 ntBASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mrpl40Q9Z2Q5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms