Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smarcb1Q9Z0H3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm37917-201ENSMUST00000194711 392 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcb1Q9Z0H3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gm9794-201ENSMUST00000202370 423 ntBASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcb1Q9Z0H3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcb1Q9Z0H3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Smarcb1Q9Z0H3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms