Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Gm24694-201ENSMUST00000180054 110 ntBASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Gm27663-201ENSMUST00000184839 110 ntBASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx9Q9WUH2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Gm15321-201ENSMUST00000121290 288 ntBASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx9Q9WUH2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Lhx9Q9WUH2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Gm45453-201ENSMUST00000211758 853 ntBASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx9Q9WUH2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms