Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn11aQ9R053 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn11aQ9R053 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn11aQ9R053 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12403-201ENSMUST00000121384 959 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm7287-201ENSMUST00000205267 602 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm18473-201ENSMUST00000220543 868 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Gm12928-201ENSMUST00000117115 573 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.61■□□□□ 0.25
Scn11aQ9R053 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn11aQ9R053 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn11aQ9R053 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Gm24644-201ENSMUST00000157114 139 ntBASIC16.6■□□□□ 0.25
Scn11aQ9R053 Mir8109-201ENSMUST00000184375 117 ntBASIC16.6■□□□□ 0.25
Scn11aQ9R053 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn11aQ9R053 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.59■□□□□ 0.25
Scn11aQ9R053 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.59■□□□□ 0.25
Scn11aQ9R053 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Gm18054-201ENSMUST00000207539 555 ntBASIC16.59■□□□□ 0.25
Scn11aQ9R053 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms