Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prg4Q9JM99 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm5866-201ENSMUST00000177881 973 ntBASIC12.94□□□□□ -0.34
Prg4Q9JM99 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.94□□□□□ -0.34
Prg4Q9JM99 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prg4Q9JM99 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm7488-201ENSMUST00000117148 684 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm9522-201ENSMUST00000182394 926 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.93□□□□□ -0.34
Prg4Q9JM99 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prg4Q9JM99 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prg4Q9JM99 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms