Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ldb3Q9JKS4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ldb3Q9JKS4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Gm27618-201ENSMUST00000183671 60 ntBASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Gm27533-201ENSMUST00000183800 152 ntBASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ldb3Q9JKS4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm25144-201ENSMUST00000179561 110 ntBASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm25352-201ENSMUST00000179815 110 ntBASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Gm38294-201ENSMUST00000192831 381 ntBASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.9□□□□□ -0.34
Ldb3Q9JKS4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms