Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ush1cQ9ES64 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ush1cQ9ES64 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ush1cQ9ES64 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Gm13884-201ENSMUST00000118103 829 ntBASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.32■□□□□ 0.2
Ush1cQ9ES64 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Gm8655-201ENSMUST00000221159 852 ntBASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Ush1cQ9ES64 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Gm10499-201ENSMUST00000174094 934 ntBASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Gm43767-201ENSMUST00000198933 381 ntBASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
Ush1cQ9ES64 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ush1cQ9ES64 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms