Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.38□□□□□ -0.27
Rtp4Q9ER80 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rtp4Q9ER80 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rtp4Q9ER80 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Gm18766-201ENSMUST00000189811 808 ntBASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rtp4Q9ER80 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Gm6888-201ENSMUST00000221983 706 ntBASIC13.35□□□□□ -0.27
Rtp4Q9ER80 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rtp4Q9ER80 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms