Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2aQ9DB34 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Mir6956-201ENSMUST00000183598 62 ntBASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Gm27430-201ENSMUST00000184585 107 ntBASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Gm44333-201ENSMUST00000197168 107 ntBASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp2aQ9DB34 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm29310-201ENSMUST00000185468 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21825-201ENSMUST00000185728 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm29109-201ENSMUST00000185895 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21896-201ENSMUST00000186520 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21873-201ENSMUST00000186728 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21794-201ENSMUST00000187056 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21880-201ENSMUST00000187275 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21826-201ENSMUST00000187451 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21198-201ENSMUST00000188393 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21749-201ENSMUST00000189343 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21901-201ENSMUST00000189568 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm29424-201ENSMUST00000189716 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm28599-201ENSMUST00000189838 694 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21867-201ENSMUST00000189917 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm29269-201ENSMUST00000190087 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21722-201ENSMUST00000190153 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm28423-201ENSMUST00000190701 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21899-201ENSMUST00000190745 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21910-201ENSMUST00000191163 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21849-201ENSMUST00000191571 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm28678-201ENSMUST00000191593 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm38294-201ENSMUST00000192831 381 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm20910-201ENSMUST00000193268 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm21871-201ENSMUST00000194621 696 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms