Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3a3Q9D554 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Gm6433-201ENSMUST00000118634 875 ntBASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3a3Q9D554 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm12497-201ENSMUST00000138778 237 ntBASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gm8655-201ENSMUST00000221159 852 ntBASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sf3a3Q9D554 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm8097-201ENSMUST00000117903 829 ntBASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms