Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gm7222-201ENSMUST00000117512 906 ntBASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gm15173-201ENSMUST00000122049 433 ntBASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chaf1bQ9D0N7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm18669-201ENSMUST00000216049 778 ntBASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chaf1bQ9D0N7 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.4□□□□□ -0.27
Chaf1bQ9D0N7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chaf1bQ9D0N7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chaf1bQ9D0N7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chaf1bQ9D0N7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms