Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm13223-201ENSMUST00000118609 747 ntBASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm38294-201ENSMUST00000192831 381 ntBASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssbp3Q9D032 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ssbp3Q9D032 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ssbp3Q9D032 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssbp3Q9D032 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm27533-201ENSMUST00000183800 152 ntBASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm44344-201ENSMUST00000200287 129 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms