Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm13464-201ENSMUST00000119418 935 ntBASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm25990-201ENSMUST00000102440 86 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm7222-201ENSMUST00000117512 906 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm11764-201ENSMUST00000120221 623 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm43347-201ENSMUST00000200226 580 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm18246-201ENSMUST00000221023 728 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim13Q9CYB0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.16□□□□□ -0.3
Trim13Q9CYB0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim13Q9CYB0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms