Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ssu72Q9CY97 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gm7862-201ENSMUST00000121461 292 ntBASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gm12882-201ENSMUST00000121696 517 ntBASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssu72Q9CY97 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm13036-201ENSMUST00000117799 748 ntBASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssu72Q9CY97 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Gm13597-201ENSMUST00000121239 375 ntBASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssu72Q9CY97 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms