Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sec61bQ9CQS8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm12859-201ENSMUST00000117834 427 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm11478-201ENSMUST00000117851 599 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 H2-Pa-201ENSMUST00000182803 626 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm27631-201ENSMUST00000184163 466 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm9794-201ENSMUST00000202370 423 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 AC165157.4-201ENSMUST00000220587 139 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 AC156016.3-201ENSMUST00000228623 344 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm27528-202ENSMUST00000222916 2012 ntBASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sec61bQ9CQS8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC7.68□□□□□ -1.18
Sec61bQ9CQS8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sec61bQ9CQS8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Sec61bQ9CQS8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sec61bQ9CQS8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sec61bQ9CQS8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms