Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm7Q9CQQ8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Gm15321-201ENSMUST00000121290 288 ntBASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm7Q9CQQ8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm7Q9CQQ8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Gm9522-201ENSMUST00000182394 926 ntBASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 Gm44608-201ENSMUST00000206827 855 ntBASIC14.35□□□□□ -0.11
Lsm7Q9CQQ8 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms