Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.96□□□□□ -0.17
Trim16Q99PP9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Gm24513-201ENSMUST00000174964 138 ntBASIC13.96□□□□□ -0.17
Trim16Q99PP9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Gm27397-201ENSMUST00000184997 107 ntBASIC13.96□□□□□ -0.17
Trim16Q99PP9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim16Q99PP9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.96□□□□□ -0.18
Trim16Q99PP9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.96□□□□□ -0.18
Trim16Q99PP9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim16Q99PP9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.95□□□□□ -0.18
Trim16Q99PP9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gm14822-201ENSMUST00000122247 291 ntBASIC13.95□□□□□ -0.18
Trim16Q99PP9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.95□□□□□ -0.18
Trim16Q99PP9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.95□□□□□ -0.18
Trim16Q99PP9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.95□□□□□ -0.18
Trim16Q99PP9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim16Q99PP9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.94□□□□□ -0.18
Trim16Q99PP9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gm2756-201ENSMUST00000195851 400 ntBASIC13.94□□□□□ -0.18
Trim16Q99PP9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.94□□□□□ -0.18
Trim16Q99PP9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.94□□□□□ -0.18
Trim16Q99PP9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.94□□□□□ -0.18
Trim16Q99PP9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim16Q99PP9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms