Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh23Q99PF4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.21□□□□□ -0.13
Cdh23Q99PF4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh23Q99PF4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm37497-201ENSMUST00000195830 798 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Gm8099-201ENSMUST00000200510 742 ntBASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh23Q99PF4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm15957-201ENSMUST00000118893 974 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm25261-201ENSMUST00000157416 134 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm6222-202ENSMUST00000182143 629 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Mir6927-201ENSMUST00000184494 71 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Snord83b-201ENSMUST00000104546 94 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gm8285-201ENSMUST00000208293 759 ntBASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh23Q99PF4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms