Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm13616-201ENSMUST00000120600 222 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25349-201ENSMUST00000177728 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm23616-201ENSMUST00000177797 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25871-201ENSMUST00000177816 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24752-201ENSMUST00000178240 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24496-201ENSMUST00000178287 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25649-201ENSMUST00000178476 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25548-201ENSMUST00000178681 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm23147-201ENSMUST00000178841 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm26095-201ENSMUST00000179270 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22171-201ENSMUST00000179283 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm23936-201ENSMUST00000179354 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22619-201ENSMUST00000179516 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25255-201ENSMUST00000179579 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24755-201ENSMUST00000179691 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm26506-201ENSMUST00000179692 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm25086-201ENSMUST00000179931 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm23243-201ENSMUST00000180047 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24659-201ENSMUST00000180212 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24169-201ENSMUST00000180244 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm23689-201ENSMUST00000180354 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm27359-201ENSMUST00000184153 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm27785-201ENSMUST00000184268 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm27466-201ENSMUST00000184396 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm27703-201ENSMUST00000184836 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.9□□□□□ -0.19
Msh4Q99MT2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.9□□□□□ -0.19
Msh4Q99MT2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Msh4Q99MT2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gm25287-201ENSMUST00000103846 110 ntBASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gm22918-201ENSMUST00000103855 110 ntBASIC13.89□□□□□ -0.19
Msh4Q99MT2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gm24158-201ENSMUST00000175263 71 ntBASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.89□□□□□ -0.19
Msh4Q99MT2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Msh4Q99MT2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms