Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm43179-201ENSMUST00000198797 275 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm9257-201ENSMUST00000221254 232 ntBASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx6-1Q99MA9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm11814-201ENSMUST00000119515 929 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm8652-201ENSMUST00000181363 964 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm27572-201ENSMUST00000183702 255 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms