Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.5□□□□□ -0.41
Scrt1Q99M85 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.5□□□□□ -0.41
Scrt1Q99M85 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Gm15823-201ENSMUST00000064305 670 ntBASIC12.5□□□□□ -0.41
Scrt1Q99M85 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scrt1Q99M85 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gm11918-201ENSMUST00000121660 179 ntBASIC12.49□□□□□ -0.41
Scrt1Q99M85 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.49□□□□□ -0.41
Scrt1Q99M85 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.49□□□□□ -0.41
Scrt1Q99M85 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.49□□□□□ -0.41
Scrt1Q99M85 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scrt1Q99M85 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Gm10766-202ENSMUST00000194123 606 ntBASIC12.48□□□□□ -0.41
Scrt1Q99M85 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Dupd1-202ENSMUST00000224735 548 ntBASIC12.48□□□□□ -0.41
Scrt1Q99M85 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scrt1Q99M85 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms