Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.48■□□□□ 0.39
RtcbQ99LF4 Gm38223-201ENSMUST00000194484 695 ntBASIC17.48■□□□□ 0.39
RtcbQ99LF4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Gm6013-201ENSMUST00000212264 699 ntBASIC17.48■□□□□ 0.39
RtcbQ99LF4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.48■□□□□ 0.39
RtcbQ99LF4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.48■□□□□ 0.39
RtcbQ99LF4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RtcbQ99LF4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Gm22331-201ENSMUST00000158066 136 ntBASIC17.47■□□□□ 0.39
RtcbQ99LF4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.47■□□□□ 0.39
RtcbQ99LF4 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.47■□□□□ 0.39
RtcbQ99LF4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.47■□□□□ 0.39
RtcbQ99LF4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RtcbQ99LF4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.47■□□□□ 0.39
RtcbQ99LF4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.46■□□□□ 0.39
RtcbQ99LF4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm18054-201ENSMUST00000207539 555 ntBASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.46■□□□□ 0.39
RtcbQ99LF4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RtcbQ99LF4 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.46■□□□□ 0.38
RtcbQ99LF4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.46■□□□□ 0.38
RtcbQ99LF4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RtcbQ99LF4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm16177-201ENSMUST00000120728 718 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.45■□□□□ 0.38
RtcbQ99LF4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RtcbQ99LF4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms