Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Mir1247-201ENSMUST00000116706 82 ntBASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Mir1894-201ENSMUST00000122802 81 ntBASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.22□□□□□ -0.13
Cstf1Q99LC2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.22□□□□□ -0.13
Cstf1Q99LC2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf1Q99LC2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Gm13226-201ENSMUST00000117838 404 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf1Q99LC2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf1Q99LC2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.2□□□□□ -0.14
Cstf1Q99LC2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms