Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm13418-201ENSMUST00000119097 944 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm4535-201ENSMUST00000182274 558 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm18195-201ENSMUST00000207604 706 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Gm10355-201ENSMUST00000097146 517 ntBASIC14.36□□□□□ -0.11
Cdk9Q99J95 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdk9Q99J95 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gm9682-201ENSMUST00000197505 556 ntBASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gm18041-201ENSMUST00000218210 618 ntBASIC14.35□□□□□ -0.11
Cdk9Q99J95 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk9Q99J95 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cdk9Q99J95 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdk9Q99J95 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms