Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Mir6956-201ENSMUST00000183598 62 ntBASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm44872-201ENSMUST00000207864 420 ntBASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdha9Q91Y11 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdha9Q91Y11 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm13453-201ENSMUST00000118708 357 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm14767-201ENSMUST00000121559 586 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm8584-201ENSMUST00000171982 758 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm6888-201ENSMUST00000221983 706 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdha9Q91Y11 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms