Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhga11Q91XY8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Gm25911-201ENSMUST00000157621 56 ntBASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.8□□□□□ -0.2
Pcdhga11Q91XY8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm23935-201ENSMUST00000102303 57 ntBASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm24270-201ENSMUST00000102326 57 ntBASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm24245-201ENSMUST00000157318 57 ntBASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm37230-201ENSMUST00000194491 818 ntBASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga11Q91XY8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Gm44492-201ENSMUST00000197012 141 ntBASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhga11Q91XY8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga11Q91XY8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga11Q91XY8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga11Q91XY8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga11Q91XY8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhga11Q91XY8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms