Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.27■□□□□ 0.2
Trex1Q91XB0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.27■□□□□ 0.19
Trex1Q91XB0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trex1Q91XB0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trex1Q91XB0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.26■□□□□ 0.19
Trex1Q91XB0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.26■□□□□ 0.19
Trex1Q91XB0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trex1Q91XB0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Mir7085-201ENSMUST00000184353 66 ntBASIC16.25■□□□□ 0.19
Trex1Q91XB0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Gm6266-201ENSMUST00000203844 806 ntBASIC16.25■□□□□ 0.19
Trex1Q91XB0 Gm44719-201ENSMUST00000206404 149 ntBASIC16.25■□□□□ 0.19
Trex1Q91XB0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.25■□□□□ 0.19
Trex1Q91XB0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trex1Q91XB0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.24■□□□□ 0.19
Trex1Q91XB0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.24■□□□□ 0.19
Trex1Q91XB0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trex1Q91XB0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.23■□□□□ 0.19
Trex1Q91XB0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.23■□□□□ 0.19
Trex1Q91XB0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms