Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.26□□□□□ -0.45
Tram1Q91V04 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.26□□□□□ -0.45
Tram1Q91V04 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tram1Q91V04 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tram1Q91V04 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.25□□□□□ -0.45
Tram1Q91V04 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.25□□□□□ -0.45
Tram1Q91V04 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.25□□□□□ -0.45
Tram1Q91V04 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.25□□□□□ -0.45
Tram1Q91V04 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Tram1Q91V04 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tram1Q91V04 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Gm11780-201ENSMUST00000136880 516 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Gm2451-201ENSMUST00000199447 999 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Gm10290-201ENSMUST00000200451 999 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tram1Q91V04 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.24□□□□□ -0.45
Tram1Q91V04 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Tram1Q91V04 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tram1Q91V04 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tram1Q91V04 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Tram1Q91V04 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tram1Q91V04 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.23□□□□□ -0.45
Tram1Q91V04 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tram1Q91V04 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms