Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps39Q8R5L3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps39Q8R5L3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps39Q8R5L3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm11025-201ENSMUST00000140773 466 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.27□□□□□ -0.13
Vps39Q8R5L3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps39Q8R5L3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.26□□□□□ -0.13
Vps39Q8R5L3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps39Q8R5L3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms