Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm12742-201ENSMUST00000117326 410 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Mir7654-201ENSMUST00000185082 70 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm21470-201ENSMUST00000187680 696 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp33Q8R5K2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.36■□□□□ 0.21
Usp33Q8R5K2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Usp33Q8R5K2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp33Q8R5K2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.35■□□□□ 0.21
Usp33Q8R5K2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp33Q8R5K2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Usp33Q8R5K2 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.34■□□□□ 0.21
Usp33Q8R5K2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp33Q8R5K2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp33Q8R5K2 Gm12957-201ENSMUST00000117835 377 ntBASIC16.34■□□□□ 0.21
Usp33Q8R5K2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.34■□□□□ 0.21
Usp33Q8R5K2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms