Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nup35Q8R4R6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Gm18669-201ENSMUST00000216049 778 ntBASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nup35Q8R4R6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm7230-201ENSMUST00000173026 815 ntBASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm6550-201ENSMUST00000187574 993 ntBASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.62□□□□□ -0.55
Nup35Q8R4R6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nup35Q8R4R6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup35Q8R4R6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms