Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Gm7787-201ENSMUST00000216858 688 ntBASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc58Q8R3Q6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Gm11764-201ENSMUST00000120221 623 ntBASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Gm6089-201ENSMUST00000197666 938 ntBASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc58Q8R3Q6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc58Q8R3Q6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms