Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim29Q8R2Q0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim29Q8R2Q0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Mir6990-201ENSMUST00000183724 91 ntBASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim29Q8R2Q0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm25287-201ENSMUST00000103846 110 ntBASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm22918-201ENSMUST00000103855 110 ntBASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm9824-201ENSMUST00000178707 561 ntBASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Gm18049-201ENSMUST00000208909 581 ntBASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim29Q8R2Q0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim29Q8R2Q0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms