Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Gm9182-201ENSMUST00000217829 639 ntBASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nudcd3Q8R1N4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nudcd3Q8R1N4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nudcd3Q8R1N4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms