Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Gm5312-201ENSMUST00000203728 547 ntBASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clrn1Q8K445 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Clrn1Q8K445 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clrn1Q8K445 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Clrn1Q8K445 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clrn1Q8K445 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Clrn1Q8K445 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.45□□□□□ -0.26
Clrn1Q8K445 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.45□□□□□ -0.26
Clrn1Q8K445 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gm13015-201ENSMUST00000118674 204 ntBASIC13.45□□□□□ -0.26
Clrn1Q8K445 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.45□□□□□ -0.26
Clrn1Q8K445 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clrn1Q8K445 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22065-201ENSMUST00000103753 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22066-201ENSMUST00000103761 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24932-201ENSMUST00000103763 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24115-201ENSMUST00000103799 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22190-201ENSMUST00000103827 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22191-201ENSMUST00000103831 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24721-201ENSMUST00000103849 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm28018-201ENSMUST00000103869 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm26399-201ENSMUST00000103937 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm14701-201ENSMUST00000117156 348 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm25349-201ENSMUST00000177728 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm23616-201ENSMUST00000177797 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm25871-201ENSMUST00000177816 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24752-201ENSMUST00000178240 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24496-201ENSMUST00000178287 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm25649-201ENSMUST00000178476 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm25548-201ENSMUST00000178681 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm23147-201ENSMUST00000178841 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm26095-201ENSMUST00000179270 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22171-201ENSMUST00000179283 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm23936-201ENSMUST00000179354 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm22619-201ENSMUST00000179516 110 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms