Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtn1Q8K0T0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Rtn1Q8K0T0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Rtn1Q8K0T0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Gm27622-201ENSMUST00000183779 60 ntBASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rtn1Q8K0T0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.44■□□□□ 0.22
Rtn1Q8K0T0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Gm38294-201ENSMUST00000192831 381 ntBASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Gm16476-201ENSMUST00000221544 139 ntBASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn1Q8K0T0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms