Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc28aQ8CEI3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc28aQ8CEI3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc28aQ8CEI3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc28aQ8CEI3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc28aQ8CEI3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm13597-201ENSMUST00000121239 375 ntBASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Matn2-206ENSMUST00000228570 2798 ntBASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc28aQ8CEI3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc28aQ8CEI3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Gm5479-201ENSMUST00000160578 435 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Thap2-203ENSMUST00000218989 527 ntBASIC15.02■□□□□ -0
Ccdc28aQ8CEI3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc28aQ8CEI3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc28aQ8CEI3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc28aQ8CEI3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc28aQ8CEI3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc28aQ8CEI3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms