Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup88Q8CEC0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Nup88Q8CEC0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nup88Q8CEC0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Nup88Q8CEC0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nup88Q8CEC0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nup88Q8CEC0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Gm27622-201ENSMUST00000183779 60 ntBASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup88Q8CEC0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup88Q8CEC0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup88Q8CEC0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Gm11543-201ENSMUST00000120758 370 ntBASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup88Q8CEC0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms