Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lrif1Q8CDD9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lrif1Q8CDD9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Gm11594-201ENSMUST00000122313 162 ntBASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lrif1Q8CDD9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms