Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm2451-201ENSMUST00000199447 999 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm10290-201ENSMUST00000200451 999 ntBASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps9d1Q8C190 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.36□□□□□ -0.27
Vps9d1Q8C190 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps9d1Q8C190 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.35□□□□□ -0.27
Vps9d1Q8C190 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps9d1Q8C190 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms