Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cpne1Q8C166 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cpne1Q8C166 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.34□□□□□ -0.27
Cpne1Q8C166 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cpne1Q8C166 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne1Q8C166 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.33□□□□□ -0.28
Cpne1Q8C166 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne1Q8C166 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Gm29541-201ENSMUST00000191351 678 ntBASIC13.32□□□□□ -0.28
Cpne1Q8C166 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.32□□□□□ -0.28
Cpne1Q8C166 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.32□□□□□ -0.28
Cpne1Q8C166 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpne1Q8C166 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms