Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim47Q8C0E3 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm27437-201ENSMUST00000183429 107 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Mir6977-201ENSMUST00000184960 64 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm33320-201ENSMUST00000192232 530 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim47Q8C0E3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim47Q8C0E3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim47Q8C0E3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gm15460-201ENSMUST00000118147 391 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gm15321-201ENSMUST00000121290 288 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gm16215-201ENSMUST00000161990 637 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms