Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap1Q8BTW8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm12585-201ENSMUST00000117307 290 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm15460-201ENSMUST00000118147 391 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm15393-201ENSMUST00000120499 219 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap1Q8BTW8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms