Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp2bQ8BJF9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Gm37230-201ENSMUST00000194491 818 ntBASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp2bQ8BJF9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp2bQ8BJF9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp2bQ8BJF9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp2bQ8BJF9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp2bQ8BJF9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp2bQ8BJF9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms