Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Gm11779-201ENSMUST00000118541 368 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Rpph1-201ENSMUST00000175096 319 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm6443-201ENSMUST00000203599 874 ntBASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc40Q8BI79 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.88□□□□□ -0.03
Ccdc40Q8BI79 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms